Spatial omics in the browser for hundreds of images at once | 10x, IMC, IF, H&E, CosMX, & more | https://rakaia.io/

A bioinformatics best-practice processing and quality control pipeline for Xenium and Artera data

Cell-GPS is the Python package and reference implementation for Cophenetic Spatial Topology Embedding (COSTE), a spatial topology analysis framework for spatial omics data.

Additional MultiQC report sections for 10x Genomics Xenium data.